FLRT2

Protein-coding gene in the species Homo sapiens
FLRT2
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

4V2C, 4V2D

Identifiers
AliasesFLRT2, fibronectin leucine rich transmembrane protein 2
External IDsOMIM: 604807; MGI: 3603594; HomoloGene: 8291; GeneCards: FLRT2; OMA:FLRT2 - orthologs
Gene location (Human)
Chromosome 14 (human)
Chr.Chromosome 14 (human)[1]
Chromosome 14 (human)
Genomic location for FLRT2
Genomic location for FLRT2
Band14q31.3Start85,530,144 bp[1]
End85,654,428 bp[1]
Gene location (Mouse)
Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Chromosome 12 (mouse)
Genomic location for FLRT2
Genomic location for FLRT2
Band12|12 EStart95,659,000 bp[2]
End95,751,989 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • germinal epithelium

  • parietal pleura

  • middle temporal gyrus

  • retinal pigment epithelium

  • spinal ganglia

  • Brodmann area 23

  • trigeminal ganglion

  • body of pancreas

  • tibia

  • Epithelium of choroid plexus
Top expressed in
  • Rostral migratory stream

  • ciliary body

  • retinal pigment epithelium

  • vestibular membrane of cochlear duct

  • epithelium of lens

  • endothelial cell of lymphatic vessel

  • sciatic nerve

  • vas deferens

  • hand

  • conjunctival fornix
More reference expression data
BioGPS


More reference expression data
Gene ontology
Molecular function
  • protein-macromolecule adaptor activity
  • fibroblast growth factor receptor binding
  • protein kinase inhibitor activity
  • chemorepellent activity
Cellular component
  • cytoplasm
  • organelle membrane
  • integral component of membrane
  • endoplasmic reticulum membrane
  • membrane
  • intracellular membrane-bounded organelle
  • cell-cell junction
  • focal adhesion
  • synapse
  • integral component of plasma membrane
  • extracellular region
  • cell junction
  • endoplasmic reticulum
  • neuron projection
  • extracellular exosome
  • plasma membrane
  • extracellular space
  • extracellular matrix
Biological process
  • negative chemotaxis
  • negative regulation of protein kinase activity
  • cytokine-mediated signaling pathway
  • cell adhesion involved in heart morphogenesis
  • heart morphogenesis
  • axon guidance
  • multicellular organism development
  • cell adhesion
  • basement membrane organization
  • regulation of neuron migration
  • negative regulation of receptor signaling pathway via JAK-STAT
  • positive regulation of synapse assembly
  • fibroblast growth factor receptor signaling pathway
  • biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23768

399558

Ensembl

ENSG00000185070

ENSMUSG00000047414

UniProt

O43155

Q8BLU0

RefSeq (mRNA)

NM_001346143
NM_001346144
NM_001346145
NM_001346146
NM_013231

NM_201518

RefSeq (protein)

NP_001333072
NP_001333073
NP_001333074
NP_001333075
NP_037363

NP_958926

Location (UCSC)Chr 14: 85.53 – 85.65 MbChr 12: 95.66 – 95.75 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Fibronectin leucine-rich repeat transmembrane protein FLRT2 is a protein that in humans is encoded by the FLRT2 gene.[5][6][7]

Function

This gene encodes a member of the fibronectin leucine rich transmembrane protein (FLRT) family. FLRT family members may function in cell adhesion and/or receptor signalling. Their protein structures resemble small leucine-rich proteoglycans found in the extracellular matrix.[7]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000185070 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000047414 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Lacy SE, Bönnemann CG, Buzney EA, Kunkel LM (December 1999). "Identification of FLRT1, FLRT2, and FLRT3: a novel family of transmembrane leucine-rich repeat proteins". Genomics. 62 (3): 417–26. doi:10.1006/geno.1999.6033. PMID 10644439.
  6. ^ Haines BP, Wheldon LM, Summerbell D, Heath JK, Rigby PW (September 2006). "Regulated expression of FLRT genes implies a functional role in the regulation of FGF signalling during mouse development". Developmental Biology. 297 (1): 14–25. doi:10.1016/j.ydbio.2006.04.004. PMID 16872596.
  7. ^ a b "Entrez Gene: FLRT2 fibronectin leucine rich transmembrane protein 2".

Further reading

  • Zhang Z, Henzel WJ (October 2004). "Signal peptide prediction based on analysis of experimentally verified cleavage sites". Protein Science. 13 (10): 2819–24. doi:10.1110/ps.04682504. PMC 2286551. PMID 15340161.
  • Ishikawa K, Nagase T, Nakajima D, Seki N, Ohira M, Miyajima N, Tanaka A, Kotani H, Nomura N, Ohara O (October 1997). "Prediction of the coding sequences of unidentified human genes. VIII. 78 new cDNA clones from brain which code for large proteins in vitro". DNA Research. 4 (5): 307–13. doi:10.1093/dnares/4.5.307. PMID 9455477.
  • Bonaldo MF, Lennon G, Soares MB (September 1996). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Research. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
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