INTS12

Protein-coding gene in the species Homo sapiens
INTS12
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1WEV

Identifiers
AliasesINTS12, INT12, PHF22, SBBI22, integrator complex subunit 12
External IDsOMIM: 611355; MGI: 1919043; HomoloGene: 32474; GeneCards: INTS12; OMA:INTS12 - orthologs
Gene location (Mouse)
Chromosome 3 (mouse)
Chr.Chromosome 3 (mouse)[1]
Chromosome 3 (mouse)
Genomic location for INTS12
Genomic location for INTS12
Band3|3 G3Start132,797,601 bp[1]
End132,816,749 bp[1]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • oocyte

  • secondary oocyte

  • right ventricle

  • islet of Langerhans

  • gastrocnemius muscle

  • jejunal mucosa

  • triceps brachii muscle

  • ganglionic eminence

  • biceps brachii

  • Achilles tendon
Top expressed in
  • secondary oocyte

  • genital tubercle

  • zygote

  • primary oocyte

  • tail of embryo

  • granulocyte

  • otic placode

  • medial ganglionic eminence

  • epiblast

  • maxillary prominence
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
  • protein binding
  • metal ion binding
Cellular component
  • integrator complex
  • nucleoplasm
  • nucleus
Biological process
  • snRNA processing
  • snRNA transcription by RNA polymerase II
  • snRNA 3'-end processing
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

57117

71793

Ensembl

n/a

ENSMUSG00000028016

UniProt

Q96CB8

Q9D168

RefSeq (mRNA)

NM_001142471
NM_020395

NM_027927

RefSeq (protein)

NP_001135943
NP_065128
NP_001135943.1
NP_065128.2

NP_082203

Location (UCSC)n/aChr 3: 132.8 – 132.82 Mb
PubMed search[2][3]
Wikidata
View/Edit HumanView/Edit Mouse

Integrator complex subunit 12 (Int12) also known as PHD finger protein 22 (PHF22) is a protein that in humans is encoded by the INTS12 gene.[4]

INTS12 is a subunit of the Integrator complex, which associates with the C-terminal domain of RNA polymerase II large subunit (POLR2A) and mediates 3-prime end processing of small nuclear RNAs U1 (RNU1) and U2 (RNU2)[4][5]

References

  1. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000028016 – Ensembl, May 2017
  2. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  3. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ a b "Entrez Gene: integrator complex subunit 12". Retrieved 2011-08-30.
  5. ^ Baillat D, Hakimi MA, et al. (2005). "Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II". Cell. 123 (2): 265–76. doi:10.1016/j.cell.2005.08.019. PMID 16239144. S2CID 18069461.

Further reading

  • Kalsi G, Kuo PH, Aliev F, et al. (2010). "A systematic gene-based screen of chr4q22-q32 identifies association of a novel susceptibility gene, DKK2, with the quantitative trait of alcohol dependence symptom counts". Hum. Mol. Genet. 19 (12): 2497–506. doi:10.1093/hmg/ddq112. PMC 2876884. PMID 20332099.
  • Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.


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